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GST Returns in Pune: Monthly, Quarterly and Annual Filing

Reviewed by CA and CS Team, Patron Accounting LLP ICAI & ICSI Registered| 15+ Years Experience| Last Updated: 23 March 2026 Verify Credentials →

Documents: Sales invoices, purchase records, ITC details, bank statements, e-way bills

Fees: No government fee for return filing | Professional fee Rs 1,500 - Rs 5,000 per month

Eligibility: All GST-registered businesses must file returns regardless of business activity

Deadlines: GSTR-1 by 11th monthly | GSTR-3B by 20th monthly | GSTR-9 by 31 December annually

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GST Returns in Pune - Overview

📌 TL;DR - GST Returns in Pune Services at a Glance

GST returns are periodic filings that every GST-registered business must submit on gst.gov.in declaring sales, purchases, tax collected, ITC claimed, and net tax payable. Pune businesses file GSTR-1 (outward supplies) by the 11th and GSTR-3B (summary + tax payment) by the 20th of every month. Annual return GSTR-9 is due by 31 December. Late filing attracts Rs 50 per day (Rs 20 for nil) plus 18% interest on unpaid tax.

Pune is one of Maharashtra's largest GST revenue centres, with over 3 lakh registered GSTINs spanning the Hinjewadi-Kharadi IT corridor, the Chakan-Talegaon auto manufacturing belt, the Pune Camp-Swargate trading hub, MIDC Bhosari's industrial zone, and a growing D2C e-commerce ecosystem in Baner and Koregaon Park. The CGST Commissionerate Pune-I and Pune-II and Maharashtra SGST Pune Division jointly administer GST compliance. Learn more about GST Returns across India.

Late filing doesn't just attract penalties - it blocks your buyers' Input Tax Credit, disrupts supply chain relationships, and can trigger scrutiny notices from CGST Pune. Whether you are a Chakan manufacturer under QRMP or a Hinjewadi IT company managing multi-GSTIN returns, accurate filing is a non-negotiable monthly discipline. Patron Accounting's Pune office handles the complete cycle via gst.gov.in. For new registrations, see GST Registration in Pune.

Content is reviewed quarterly for accuracy.

What Are GST Returns?

A GST return is a periodic document filed on the GST portal (gst.gov.in) by every registered taxpayer, declaring outward supplies (sales), inward supplies (purchases), tax collected, ITC claimed, and net GST payable or refundable under the CGST Act, 2017.

The system comprises: GSTR-1 (invoice-level outward supply details, due 11th monthly), GSTR-3B (self-declared summary with tax payment, due 20th monthly), GSTR-9 (annual consolidation, due 31 December), and GSTR-9C (self-certified reconciliation for turnover above Rs 5 crore). QRMP filers submit quarterly with monthly PMT-06 payments.

For Pune's ecosystem - where Hinjewadi IT companies generate inter-state service invoices, MIDC Bhosari manufacturers handle complex input credits, and Pune Camp traders process thousands of B2B invoices - GST returns are the backbone of compliance. From July 2025, auto-populated GSTR-3B liability from GSTR-1 is hard-locked, and returns cannot be filed more than 3 years late - making accurate filing critical. Related: GST Notice handling in Pune.

Key Terms for GST Returns in Pune:

  • GSTR-1: Monthly/quarterly return for outward supply details, due by the 11th
  • GSTR-3B: Monthly summary return with tax payment, due by the 20th
  • GSTR-9: Annual return consolidating the full financial year, due 31 December
  • QRMP: Quarterly Return Monthly Payment scheme for turnover up to Rs 5 crore
  • ITC: Input Tax Credit - GST on purchases set off against GST on sales
  • PMT-06: Monthly estimated tax payment for QRMP filers in first 2 months of quarter
GST GST Returns in Pune
CGST Pune Commissionerate I & II

Who Must File GST Returns in Pune?

Every GST-Registered Business - Filing is mandatory regardless of business activity. Even zero-transaction months require nil returns. Non-filing for consecutive periods triggers registration cancellation under Section 29.

IT Companies at Hinjewadi and Kharadi with inter-state service contracts file monthly GSTR-1 and GSTR-3B. Companies with multi-state GSTINs file 6-10 returns per month. Related: Pvt Ltd Company Compliance.

Manufacturers at MIDC Bhosari and Chakan with turnover up to Rs 5 crore can opt for QRMP (quarterly filing). Maharashtra is State Group 1 - GSTR-3B due by 22nd after quarter.

Traders at Pune Camp and Swargate filing high B2B volumes must ensure GSTR-1 accuracy as it directly impacts buyers' ITC through auto-population. Composition Dealers file CMP-08 quarterly and GSTR-4 annually. Exporters must file monthly returns with proper Table 6A declarations for refund processing.

GST Return Filing Services in Pune

ServiceWhat We Do
Monthly GSTR-1 and GSTR-3B FilingEnd-to-end monthly return filing including sales data compilation, invoice upload, ITC reconciliation, tax computation and portal submission before the 11th and 20th deadlines.
QRMP Scheme ManagementQuarterly GSTR-1 and GSTR-3B filing for Pune manufacturers with turnover up to Rs 5 crore, including monthly PMT-06 tax payment and optional IFF for B2B invoice upload.
ITC Reconciliation (GSTR-2A/2B vs GSTR-3B)Monthly reconciliation of available ITC from GSTR-2A/2B against claims in GSTR-3B, identifying mismatches and vendor follow-up for missing invoices.
GSTR-9 and GSTR-9C Annual ReturnFull-year consolidation annual return and self-certified reconciliation (turnover above Rs 5 crore) by 31 December. Linked with GST Audit.
Multi-GSTIN Return ManagementCoordinated filing across multiple state GSTINs for Hinjewadi IT companies and multi-branch businesses.
GST Compliance Health CheckPeriodic review of filing accuracy, ITC claims, reverse charge compliance and e-way bill alignment. Integrates with Tally Accounting and Accounting Services.
Our Process

GST Return Filing Process in Pune

Our Pune CA team manages the entire GST return filing cycle - from data compilation to portal submission and annual return preparation.

Step 1

Compile Sales and Purchase Data

Gather all sales invoices (B2B, B2C, exports, SEZ), purchase invoices with GST, and debit/credit notes. For Hinjewadi IT companies, classify by place of supply (IGST for inter-state, CGST+SGST for intra-Maharashtra). For MIDC Bhosari manufacturers, separate raw material, capital goods and job work. Pune Camp traders reconcile sales registers with e-invoicing data. Patron collects data via cloud-shared folders.

Data compiledPlace-of-supply classified
Invoices Compiled
Compiled01
Step 2

Reconcile ITC with GSTR-2A/2B

Before filing GSTR-3B, reconcile ITC available in GSTR-2A/2B (auto-populated from vendors' GSTR-1) against ITC you intend to claim. Identify missing invoices, excess claims and ineligible ITC. For Pune businesses with 50+ vendors, this is time-intensive but critical. From July 2025, GSTR-3B liability is hard-locked from GSTR-1.

ITC reconciledMismatches identified
2A/2B3B ITCITC Match
ITC Clean02
Step 3

File GSTR-1 by the 11th of Each Month

Log in to gst.gov.in, upload invoice-level data. B2B invoices include buyer GSTIN, invoice number, taxable value and GST rate. B2C reported in aggregate. Export invoices in Table 6A. For Chakan manufacturers, ensure e-way bill numbers align with declarations. QRMP filers submit quarterly (by 13th) with optional IFF for monthly B2B upload.

GSTR-1 filed by 11thE-invoice aligned
GSTR-1By 11th
GSTR-1 Done03
Step 4

File GSTR-3B by the 20th of Each Month

Declare total outward supplies, inter-state supplies, ITC claimed and net tax payable. Pay tax via Electronic Cash Ledger before submission. Maharashtra QRMP filers: quarterly deadline is 22nd after quarter. Patron's Pune office files after cross-verifying all liability and ITC figures against GSTR-1 data.

GSTR-3B filed by 20thTax payment confirmed
GSTR-3BBy 20thTax Paid
GSTR-3B Done04
Step 5

Make Monthly Tax Payments (QRMP Filers)

QRMP taxpayers in Pune make monthly estimated tax payments via PMT-06 by the 25th in the first two months of each quarter. Payment based on previous quarter's liability (35% method) or actual liability. Ensures cash flow to government while reducing filing burden for smaller MIDC and Chakan manufacturers.

PMT-06 paid by 25thQRMP compliance met
PMT-06By 25thQRMP Only
PMT-06 Done05
Step 6

File GSTR-9/9C Annual Return by 31 December

After FY ends (31 March), compile all monthly data into annual return GSTR-9. For turnover above Rs 5 crore, additionally file GSTR-9C (self-certified reconciliation with audited financial statements). Patron's CA team prepares alongside statutory audit ensuring consistency between tax and financial data.

GSTR-9 filedGSTR-9C reconciled (if >5cr)
GSTR-9 by 31 Dec
Annual Done06

Documents Required for GST Return Filing in Pune

  • Sales Invoices: All B2B and B2C invoices with buyer GSTIN (B2B), HSN/SAC codes, taxable value and GST rate.
  • Purchase Invoices: All purchase invoices with supplier GSTIN, HSN/SAC and GST amounts for ITC claiming.
  • Debit/Credit Notes: Any debit or credit notes issued or received during the period.
  • Bank Statements: For tax payment verification and reconciliation.
  • E-Way Bills: For goods movement transactions, ensuring alignment with GSTR-1 declarations.
  • Import/Export Documents: Bills of entry, shipping bills and customs declarations.
  • Previous Period Returns: GSTR-1, GSTR-3B, GSTR-2A/2B from prior periods for reconciliation.

Pune-specific tip: Hinjewadi IT companies should maintain a place-of-supply register. MIDC Bhosari manufacturers should keep job work challans aligned with return data. Pune Camp traders should reconcile e-invoicing data with GSTR-1 before filing.

Common Challenges in GST Return Filing in Pune

ChallengeImpactHow Patron Accounting Solves It
Multi-GSTIN Filing for IT CompaniesHinjewadi IT companies with 5 state registrations file 10 returns/month; missing one blocks buyers' ITCPatron coordinates pan-India multi-GSTIN filing with consistent data reporting
ITC Mismatch for Pune Camp Traders100+ vendor mismatches when vendors delay GSTR-1; hard-locked GSTR-3B from July 2025Patron runs monthly GSTR-2B reconciliation with systematic vendor follow-up
QRMP vs Monthly Decision for MIDCManufacturers near Rs 5 crore threshold face wrong scheme choice impacting buyer ITCPatron advises based on turnover, buyer profile and ITC flow requirements
Late Fee on Nil ReturnsSmall Pune businesses attract Rs 20/day for delayed nil filing - Rs 3,600 over 6 monthsPatron files nil returns automatically every month for all managed clients

GST Return Filing Fees in Pune

Fee ComponentAmount
Monthly GSTR-1 + GSTR-3B (up to 100 invoices)Nil govt fee + Patron Rs 1,500-3,000/month
Monthly GSTR-1 + GSTR-3B (100-500 invoices)Nil govt fee + Patron Rs 3,000-5,000/month
Monthly GSTR-1 + GSTR-3B (500+ invoices)Nil govt fee + Patron Rs 5,000-10,000/month
QRMP Quarterly Filing + PMT-06Nil govt fee + Patron Rs 3,000-5,000/quarter
GSTR-9 Annual ReturnNil govt fee + Patron Rs 5,000-15,000
GSTR-9C Reconciliation (>Rs 5 cr)Nil govt fee + Patron Rs 10,000-25,000
Multi-GSTIN (per additional GSTIN)Patron Rs 1,000-3,000/GSTIN/month
ITC Reconciliation (monthly)Patron Rs 2,000-5,000/month

All fees and charges listed are indicative only and do not constitute a binding offer. Final amounts may vary depending on the volume of work and the complexity involved.

Professional service charges for drafting, filing, and representation are separate from the statutory fees. The exact fee depends on the complexity of the case, disputed amount, and number of hearings required. Contact us for a detailed quote.

Get a free GST Returns in Pune consultation - Call +91 945 945 6700 or WhatsApp us. No-obligation assessment.

GST Return Due Dates

StageEstimated Timeline
GSTR-1 (Monthly)11th of next month
GSTR-3B (Monthly)20th of next month
GSTR-1 (Quarterly/QRMP)13th after quarter-end
GSTR-3B (Quarterly/QRMP)22nd after quarter-end (Maharashtra State Group 1)
PMT-06 (QRMP monthly tax)25th of each month (first 2 months of quarter)
CMP-08 (Composition)18th after quarter-end
GSTR-9 (Annual Return)31 December
GSTR-9C (Reconciliation)31 December (turnover above Rs 5 crore)

Pune Processing Note: All GST return filing is online via gst.gov.in. No visit to the CGST Commissionerate Pune or Maharashtra SGST office is required. Patron's Pune office at RTC Silver, Wagholi manages the complete process digitally. GSTR-3B cannot be filed more than 3 years after the due date from July 2025 onward.

Key Benefits

Why Choose Patron for GST Returns in Pune?

Pune Office Presence

Walk-in at RTC Silver, Wagholi. 30 minutes from Hinjewadi, Kharadi, Chakan, MIDC Bhosari and Pune Camp.

Volume Handling

Monthly filing for 10 to 10,000+ invoices. Multi-GSTIN coordination for Hinjewadi IT companies with pan-India registrations.

ITC Reconciliation Included

Monthly GSTR-2A/2B vs GSTR-3B matching included in every package. Vendor follow-up for missing invoices. Clean ITC ledger guaranteed.

QRMP Advisory

Expert guidance on whether QRMP is optimal for your Pune business based on turnover, buyer profile and ITC flow requirements.

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GST Return Types for Pune Businesses

ReturnTypical Pune FilerFrequencyDue Date
GSTR-1IT company Hinjewadi; manufacturer MIDCMonthly11th of next month
GSTR-3BAll registered taxpayersMonthly20th of next month
GSTR-1 (QRMP)Chakan manufacturer turnover < Rs 5 crQuarterly13th after quarter
GSTR-3B (QRMP)MIDC Bhosari unit turnover < Rs 5 crQuarterly22nd after quarter (Maha)
GSTR-9All regular taxpayersAnnual31 December
GSTR-9CTurnover > Rs 5 croreAnnual31 December
CMP-08Composition dealer PuneQuarterly18th after quarter

Related Services

Legal and Compliance Framework for GST Returns

Governing Law: CGST Act, 2017 and Maharashtra GST Act, 2017.

Key Sections: Section 37 (GSTR-1), Section 39 (GSTR-3B), Section 44 (GSTR-9), Section 47 (late fees).

Late Fee (Section 47): Rs 50/day per return (Rs 25 CGST + Rs 25 SGST) with liability; Rs 20/day for nil. Cap: Rs 5,000 per return. Must be paid in cash.

Interest (Section 50): 18% p.a. on outstanding tax from day after due date. 24% on excess ITC claimed.

3-Year Filing Limit: From July 2025, GSTR-3B cannot be filed after 3 years from due date.

Hard-Locking: From July 2025, auto-populated liability in GSTR-3B is non-editable. From Nov 2025, Table 3.2 fully locked.

QRMP: Turnover up to Rs 5 crore. Maharashtra = State Group 1 (22nd). PMT-06 by 25th monthly.

Portal: gst.gov.in | CGST Pune Zone

Pune Jurisdiction: CGST Commissionerate Pune-I and II (ICE House, 41/A Sassoon Road, Pune 411001); Maharashtra SGST Pune Division (mahagst.gov.in).

FAQs - GST Returns in Pune

Find answers to the most common questions about GST return filing in Pune.

Quick Answers

GST return kaise file karte hain? gst.gov.in par login karo, GSTR-1 11 tarikh tak aur GSTR-3B 20 tarikh tak file karo. Tax pay karo aur submit karo.

Nil return file karna zaroori hai? Haan - chahe koi bhi transaction na ho, nil GSTR-1 aur GSTR-3B file karna mandatory hai. Nahi kiya toh Rs 20/day late fee lagega.

QRMP scheme kya hai? Rs 5 crore se kam turnover wale businesses quarterly return file kar sakte hain. Maharashtra mein quarterly GSTR-3B 22 tarikh tak file hota hai.

Don't Miss the 11th and 20th - File GST Returns on Time

GST returns have immovable monthly deadlines - GSTR-1 by the 11th, GSTR-3B by the 20th - and every day of delay attracts minimum Rs 20 (nil) or Rs 50 late fee plus 18% interest. Late GSTR-1 blocks your buyers' ITC. Late GSTR-3B prevents filing subsequent returns. Consecutive non-filing triggers registration cancellation. From July 2025, returns cannot be filed more than 3 years late. Professional filing costs Rs 1,500-5,000/month - a fraction of the penalties.

File on time - Call +91 945 945 6700 or WhatsApp us. Free compliance check.

File Your GST Returns in Pune on Time, Every Time

GST return filing in Pune is a mandatory monthly discipline for every registered business - from Hinjewadi IT companies with multi-state GSTINs to Pune Camp traders and Chakan manufacturers under QRMP. Accurate, timely filing protects your business from penalties, preserves buyers' ITC and prevents scrutiny notices.

Patron Accounting's Pune office at RTC Silver, Wagholi provides end-to-end GST return filing - from monthly GSTR-1 and GSTR-3B to ITC reconciliation, QRMP management and GSTR-9/9C annual return preparation.

With 15+ years experience, 10,000+ businesses served and a 4.9 Google rating, Patron is a trusted firm for GST compliance across Pune, Mumbai, Delhi and Gurugram.

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Content Created: 23 March 2026  |  Last Updated: 23 March 2026  |  Next Review: 23 April 2026  |  Reviewed By: CA & CS Team, Patron Accounting LLP

This page is reviewed monthly to reflect GST due date changes, portal updates, QRMP scheme changes and penalty amendments. Last review: March 2026. Next review: April 2026.

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